Microsatellite Database
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Select genome
Homo sapiens - Human (NCBI 35)
(n.b. more genomes will be added soon)
Select location in genome
chromosome
entire genome
Select microsatellite features
repeat unit size:
between
2 bp (dinucleotide)
3 bp (trinucleotide)
4 bp (tetranucleotide)
5 bp (pentanucleotide)
6 bp (hexanucleotide)
and
2 bp (dinucleotide)
3 bp (trinucleotide)
4 bp (tetranucleotide)
5 bp (pentanucleotide)
6 bp (hexanucleotide)
no. of repeats:
min
max
repeat unit motif(s):
i.e. AA,GTA (or leave blank for all)
find microsatellites in:
all regions
gene regions only
exon regions only
and up to
kbp either side of gene(s)
Select additional gene-related attributes
limit search to
gene/protein function
limit search to
UCSC Gene ID
Swissprot ID
Refseq / other IDs
(enter a gene or protein id/alias)
do not limit
search
download entire VNTR database (Homo sapiens)